Publications – Arima Genomics

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Over 500 Customer Publications and Counting!

Use the filters to search for papers of interest and discover how scientists are using Arima technology to drive new insights in the life sciences.

Philosophical Transactions of the Royal Society of London 2024

Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies

Genome AssemblyHi-CMicrobiology/Infectious Disease

iScience 2024

Crosstalk between chromatin and Shavenbaby defines transcriptional output along the Drosophila intestinal stem cell lineage

Developmental BiologyGene RegulationHi-C

bioRxiv 2023

Transcription promotes discrete long-range chromatin loops besides organizing cohesin-mediated DNA folding

Gene RegulationGenome ArchitectureHi-C

Cell Reports 2023

ASCL1 characterizes adrenergic neuroblastoma via its pioneer function and cooperation with core regulatory circuit factors

CancerGene RegulationHiChIP

bioRxiv 2023

De-novogenome assembly of four rails (Aves: Rallidae): a resource for comparative genomics

Animal GenomicsGenome AssemblyHigh Coverage Hi-C

bioRxiv 2023

A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence

Developmental BiologyGenome AssemblyHigh Coverage Hi-C

bioRxiv 2023

Chromosome fusion and programmed DNA elimination shape karyotypes of parasitic nematodes

Genome AssemblyHi-CMicrobiology/Infectious Disease

bioRxiv 2023

Genomic decoding ofTheobroma grandiflorum(cupuassu) at chromosomal scale: Evolutionary insights for horticultural innovation

Genome AssemblyHigh Coverage Hi-CPlant Genomics

Research Square 2023

Two novel genomes of fireflies with different degrees of sexual dimorphism reveal insights into sex-biased gene expression and dosage compensation

Animal GenomicsGenome AssemblyHigh Coverage Hi-C

Scientific Data 2023

Chromosomal-level assembly of Tokudaia osimensis, Tokudaia tokunoshimensis, and Tokudaia muenninki genomes

Animal GenomicsGenome AssemblyHi-C

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